Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTGCAGCTGCC
..((((((((((((.......&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017019903
GeneSymbolSOX5
Binding site1464,1477
Score1.0
Seed1
Au0.412
Energy-22.0
Binding len13
Me-5.925
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure