Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACCCTGTTCAGCTGATCCCAACTACCATGGCAGCTGCT
..((((((((.((.(((.((.&.))...))).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017019903
GeneSymbolSOX5
Binding site1531,1573
Score0.962
Seed1
Au0.412
Energy-22.1
Binding len22
Me-8.639
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure