Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGTTATCTGTGGCTGCC
..((((((((((...((((((&))))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017019903
GeneSymbolSOX5
Binding site224,245
Score0.923
Seed1
Au0.544
Energy-21.7
Binding len21
Me-7.838
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure