Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTGCTGCTGTGTGCTCCTACTGGTGCTGGGA
.(((((((((((..((((((((&))))))))...))))))))............))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014014
GeneSymbolSNRNP200
Binding site1599,1634
Score0.846
Seed1
Au0.441
Energy-18.4
Binding len35
Me-5.939
Phylopstem5.525463817391303
Phylopflank5.066120712500001
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure