Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGTGTAGCCAGA
..(((((.((((.(((((....&))))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014041
GeneSymbolSPCS1
Binding site1435,1451
Score0.885
Seed0
Au0.574
Energy-19.1
Binding len16
Me-8.56
Phylopstem0.36266899999999996
Phylopflank0.09919366249999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure