Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTAGATTTTATAATTGTGGTTGTGG
..(((((((((((((((((((&.))))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017019947
GeneSymbolCACNA1C
Binding site1042,1067
Score0.846
Seed1
Au0.618
Energy-19.4
Binding len21
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings19
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure