Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTATGCATCCAGCTGCAGC
(((((((((.((.((((((((&)))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017019947
GeneSymbolCACNA1C
Binding site12812,12833
Score1.0
Seed1
Au0.456
Energy-22.2
Binding len21
Me-6.469
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure