Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAGCGTGTGCCGGGA
.((((((((((..(((......&)))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014064
GeneSymbolNTMT1
Binding site728,744
Score0.923
Seed1
Au0.382
Energy-20.9
Binding len16
Me-8.429
Phylopstem4.16849642
Phylopflank3.58647458875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure