Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGTGCTGTATGCCAGC
..((((((((((...((((...&))))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014112
GeneSymbolTRPS1
Binding site8447,8465
Score0.846
Seed1
Au0.515
Energy-18.5
Binding len18
Me-7.838
Phylopstem4.8660000000000005
Phylopflank4.108736105
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure