Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGTGCTGGGGGCCAGCAGGGCTT
((.((((((.(((((((((((&)))))....))))))..)))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_014141
GeneSymbolCNTNAP2
Binding site2848,2874
Score0.846
Seed0
Au0.382
Energy-27.2
Binding len26
Me-6.738
Phylopstem-0.11666113999999998
Phylopflank0.0885772115
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure