Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CAGTGTATGCCATGGG
.(((((((((((.((.......&)).))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014157
GeneSymbolCCDC113
Binding site1526,1542
Score1.0
Seed1
Au0.397
Energy-17.5
Binding len16
Me-5.316
Phylopstem-0.2968430499999999
Phylopflank0.661711705
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end1
Position3UTR
2D Structure