Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATGCTAGGA
.(((((((.....((((((...&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014159
GeneSymbolSETD2
Binding site8325,8339
Score0.846
Seed1
Au0.618
Energy-16.2
Binding len14
Me-13.553
Phylopstem1.0371804285714286
Phylopflank0.6979649562500001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure