Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACAGTGGTGGACATGCCAGGTT
(((((((((((..((((((...&))))))...))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014170
GeneSymbolGTPBP8
Binding site493,518
Score0.923
Seed1
Au0.603
Energy-18.6
Binding len25
Me-8.574
Phylopstem6.5535739999999985
Phylopflank4.986176050000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure