Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTGCAGAGTGTTGGGTCTGTAGCCAGC
..(((((((((..(((((((((&)))))))))..))))..........))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014174
GeneSymbolTHYN1
Binding site36,67
Score0.846
Seed1
Au0.544
Energy-18.9
Binding len31
Me-9.593
Phylopstem0.20884250000000004
Phylopflank0.40508187980769234
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end8
Position5UTR
2D Structure