Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAAGAAGGTGTTTGTCACATGCCAGGA
.(((((((((((((((((....&))))).........))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014207
GeneSymbolCD5
Binding site1148,1178
Score0.862
Seed1
Au0.441
Energy-18.4
Binding len30
Me-3.793
Phylopstem1.3465604999999996
Phylopflank0.7422283950000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure