Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGTGGAGGCAGTAGGGA
...((((((.(((((((((((&))))).)))))).)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_014212
GeneSymbolHOXC11
Binding site1779,1799
Score0.923
Seed0
Au0.441
Energy-30.3
Binding len20
Me-7.757
Phylopstem0.8689965583333333
Phylopflank0.52174409375
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end8
Position3UTR
2D Structure