Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAAGGTGGGGCCTG
((.((((...(((((((((((&))))))))))))))).)).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_014212
GeneSymbolHOXC11
Binding site2588,2607
Score1.0
Seed0
Au0.353
Energy-27.6
Binding len19
Me-10.108
Phylopstem1.1352333636363634
Phylopflank0.9651654160000003
Longest consecutive pairings15
Position of longest consecutive pairings4
Pairings in 3prime end8
Position3UTR
2D Structure