Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCATCGGCTGGGTG
(((((((.....((((((((..&))))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_014229
GeneSymbolSLC6A11
Binding site1490,1508
Score0.885
Seed1
Au0.515
Energy-17.0
Binding len18
Me-14.722
Phylopstem2.8212533375
Phylopflank4.33394071875
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure