Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCAACATAAATCATAACTTGCATGCATGTGCCAGGC
.(((((((((..((((((....&.))))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001424
GeneSymbolEMP2
Binding site1768,1805
Score0.923
Seed1
Au0.544
Energy-20.6
Binding len20
Me-9.965
Phylopstem-0.18555116222222223
Phylopflank0.12689052375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure