Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATAGCCAGGA
.((((((.....(((((((...&))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001497
GeneSymbolB4GALT1
Binding site3982,3997
Score0.846
Seed1
Au0.382
Energy-17.4
Binding len15
Me-14.577
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure