Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATGGTTCAGCAAATTCAGTCTGTGTGCATGGAGTGCCAGGG
.((((((((...(((((.((..&.)).)))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001539
GeneSymbolDNAJA1
Binding site623,666
Score0.923
Seed1
Au0.471
Energy-21.6
Binding len21
Me-11.207
Phylopstem1.1615573750000001
Phylopflank0.9383730950000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure