Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCTTGTGTGCTCATGAAGACATGCCCACGCCATGGAGCCAGGG
.((((((((((((.((((((..&))))))))))))............................)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001543
GeneSymbolNDST1
Binding site5356,5403
Score0.923
Seed1
Au0.426
Energy-20.1
Binding len47
Me-4.65
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings35
Pairings in 3prime end6
Position3UTR
2D Structure