Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAAGTGACGGTTTAATGGGCACAGGGTTTA
((((((((..(((((((((..&)))))..............)))).)))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001557
GeneSymbolCXCR2
Binding site2546,2579
Score0.846
Seed1
Au0.559
Energy-22.3
Binding len33
Me-6.236
Phylopstem-0.1052642739130435
Phylopflank-0.3065860425
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure