Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATTTACAGACTGATGCCAGA
..(((((((....((((((((.&)))))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001635
GeneSymbolAMPH
Binding site2202,2223
Score0.923
Seed1
Au0.618
Energy-18.4
Binding len21
Me-13.66
Phylopstem0.51628343
Phylopflank-0.008641779999999974
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure