Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTTCTCTTGTCATTCATCCAGGCATGGGCTGCCAGGTT
((((((((..(.((((......&.)))).)..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001649
GeneSymbolSHROOM2
Binding site5381,5421
Score0.846
Seed1
Au0.485
Energy-18.6
Binding len18
Me-9.583
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure