Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGTACTCTCTTTGCAGTGAATTTGGAATGGAAGGCCAGGTT
(((((((...((.(.(((((((&.))))))).).))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001690
GeneSymbolATP6V1A
Binding site2288,2334
Score0.923
Seed1
Au0.618
Energy-17.8
Binding len25
Me-10.575
Phylopstem0.18698424285714288
Phylopflank0.1224785380625
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure