Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGAGGCTAAAGCCCAGAGACAGCTTGATCAAAGGCACACAGCAAGTCAGGGTTG
.(((((((((((((((((...&)))))))))..........................)))............))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001768
GeneSymbolCD8A
Binding site1143,1199
Score0.859
Seed1
Au0.441
Energy-21.5
Binding len56
Me-3.793
Phylopstem-0.3913010963636363
Phylopflank-0.47298544625000005
Longest consecutive pairings9
Position of longest consecutive pairings47
Pairings in 3prime end5
Position3UTR
2D Structure