Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCGTTTTTATACTGAGTGTGCCTAGGTT
(((((((((((((((((((...&))))))))..........))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001793
GeneSymbolCDH3
Binding site3066,3097
Score0.821
Seed1
Au0.574
Energy-21.2
Binding len31
Me-3.938
Phylopstem-0.16915786333333335
Phylopflank0.3888311474999999
Longest consecutive pairings8
Position of longest consecutive pairings23
Pairings in 3prime end5
Position3UTR
2D Structure