Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTGCACACATCTGTGCCAGGC
.(((((((((..((((......&.)))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001794
GeneSymbolCDH4
Binding site4807,4830
Score0.846
Seed1
Au0.426
Energy-17.7
Binding len16
Me-9.965
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure