Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGGAAGGAATTGGTTCTGCAGGACAGTGAGAGGGTCTG
((((((((((((((((((.((&)))))))))........)))))...........)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001794
GeneSymbolCDH4
Binding site4333,4373
Score0.923
Seed1
Au0.353
Energy-27.0
Binding len40
Me-3.938
Phylopstem-0.12378124864864862
Phylopflank-0.09323951875
Longest consecutive pairings9
Position of longest consecutive pairings31
Pairings in 3prime end7
Position3UTR
2D Structure