Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCTCTGTATGTCAGGTG
((((((((((((..((......&))..)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001797
GeneSymbolCDH11
Binding site5839,5856
Score1.0
Seed1
Au0.588
Energy-20.3
Binding len17
Me-6.084
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure