Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAGATGGCCAGGA
.((((((......((((((...&))))))....)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001835
GeneSymbolCLTCL1
Binding site3545,3562
Score0.846
Seed1
Au0.544
Energy-18.8
Binding len17
Me-15.867
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure