Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCAGGAGTGCCAGGC
.((((((((....(((((....&)))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001845
GeneSymbolCOL4A1
Binding site1652,1669
Score0.846
Seed1
Au0.397
Energy-18.1
Binding len17
Me-12.497
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure