Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGGGGCTGGAGGA
....(((.(((((.((((((.&))))))))))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001848
GeneSymbolCOL6A1
Binding site586,602
Score0.923
Seed0
Au0.338
Energy-26.6
Binding len16
Me-12.717
Phylopstem0.7739250383333333
Phylopflank0.499062040375
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure