Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTATGCCGGGC
.(((((((((((..........&))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001850
GeneSymbolCOL8A1
Binding site2437,2449
Score0.923
Seed1
Au0.471
Energy-19.6
Binding len12
Me-6.908
Phylopstem1.1483211818181815
Phylopflank2.035574865
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure