Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCCATATATTGGTGCTAGA
..(((((((.(((((((((((.&))))..)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001855
GeneSymbolCOL15A1
Binding site4521,4542
Score0.846
Seed1
Au0.574
Energy-16.1
Binding len21
Me-6.2
Phylopstem3.140019461538462
Phylopflank3.1029541618749996
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure