Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATCCCTGGTGTGCCAGGC
.((((((((((...........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001856
GeneSymbolCOL16A1
Binding site3153,3173
Score0.923
Seed1
Au0.382
Energy-19.3
Binding len12
Me-10.255
Phylopstem2.1828547
Phylopflank4.682750319999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure