Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGTATCCTGGGCTCCTGGCCTGTGGCTGCTCGGTCTT
(((((..((((((..(((((.&))))).....................))))))..))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001856
GeneSymbolCOL16A1
Binding site217,257
Score0.846
Seed0
Au0.382
Energy-25.7
Binding len40
Me-8.975
Phylopstem3.0669778499999993
Phylopflank2.6394971162499994
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure