Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATGAACAAGGGGTGCCAGGA
.((((((((.(..(((..((((&))))..)))..).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001874
GeneSymbolCPM
Binding site3782,3804
Score0.846
Seed1
Au0.5
Energy-18.4
Binding len22
Me-9.672
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure