Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGTATGCCACTGGTT
(((((((((((((.........&))))))))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001908
GeneSymbolCTSB
Binding site2686,2702
Score0.923
Seed1
Au0.574
Energy-16.3
Binding len16
Me-5.763
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end0
Position3UTR
2D Structure