Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAATGTATGCCC
....((((((((.((((((...&)))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001940
GeneSymbolATN1
Binding site4572,4588
Score0.923
Seed0
Au0.441
Energy-20.5
Binding len16
Me-10.836
Phylopstem0.9099817975
Phylopflank0.8233886349999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure