Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTATCGTGTCTCAGTGCAGCCGAGGCAGAGCCTTTGAAGGATGCGAT
((((((((.((((((((((((&))))..............)))))))).)))...............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001345917
GeneSymbolWDR53
Binding site330,381
Score0.846
Seed1
Au0.5
Energy-18.3
Binding len51
Me-4.994
Phylopstem0.11181685000000001
Phylopflank0.0008247324999999909
Longest consecutive pairings8
Position of longest consecutive pairings25
Pairings in 3prime end8
Position5UTR
2D Structure