Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCTGGCAGGCGCTGCTGCAGTGCCAGGG
.((((((((....(((((....&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002048
GeneSymbolGAS1
Binding site865,897
Score1.0
Seed1
Au0.309
Energy-19.6
Binding len15
Me-12.497
Phylopstem4.30679275
Phylopflank5.263643515000001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure