Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGACCCCTGTGGCTGCAGA
((((((((((((..((..(((&)))...))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017021832
GeneSymbolRGS6
Binding site2282,2305
Score1.0
Seed1
Au0.441
Energy-19.9
Binding len23
Me-6.084
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure