Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACTACATGCCAGGTA
(((((((((.....((((....&))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_017021879
GeneSymbolCHP1
Binding site4319,4336
Score0.923
Seed1
Au0.603
Energy-18.8
Binding len17
Me-13.498
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure