Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTATTTGTAAAGGCCAGC
..(((((.(((((.((((((((&)))))))))))))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002094
GeneSymbolGSPT1
Binding site1619,1641
Score0.846
Seed0
Au0.544
Energy-17.4
Binding len22
Me-8.127
Phylopstem1.3359045
Phylopflank1.8442946399999998
Longest consecutive pairings13
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure