Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGATATTTCCCCAGCTGCAC
.((((((((.((...(((((.&)))))......)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017021879
GeneSymbolCHP1
Binding site5825,5848
Score0.846
Seed1
Au0.544
Energy-20.6
Binding len23
Me-7.917
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure