Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAATAATCGCTCTGCC
..((((..((((((((.((((&)))).)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017021879
GeneSymbolCHP1
Binding site5742,5761
Score1.0
Seed0
Au0.529
Energy-20.3
Binding len19
Me-8.814
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure