Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAGATCGCGCCACTGCAC
.(((((.(((((((...((((&))))..)))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_017021879
GeneSymbolCHP1
Binding site3906,3928
Score0.923
Seed0
Au0.397
Energy-19.5
Binding len22
Me-6.306
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure