Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTATGCCGGA
..(((((((((...........&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_002097
GeneSymbolGTF3A
Binding site779,789
Score0.923
Seed1
Au0.662
Energy-16.0
Binding len10
Me-11.418
Phylopstem5.505313444444444
Phylopflank5.773968675
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure